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    Home » Recipes » Breads & Biscuits

    Cheesy Almond Flour Muffins (Low Carb, Gluten-Free)

    Published: Jan 12, 2017 · Modified: Aug 17, 2025 by Barbara Curry

    Jump to Recipe
    4.12 from 53 votes

    Disclaimer: This post may contain affiliate links.

    Cheesy Muffins with Almond Flour in a basket and a cut muffin with butter melting in the middle.
    Cheesy Muffins with Almond Flour in a basket and a cut muffin with butter melting in the middle.

    Warm, cheesy, and tender, these almond flour muffins are the kind you’ll want to keep on repeat. The almond flour gives them a rich, slightly nutty flavor that feels special, while the gooey cheese makes them perfect with soup, chili, or even breakfast. They’re naturally gluten-free and low carb, but what you’ll really notice is how soft and delicious they are fresh from the oven.

    A basket of muffins with almond flour in a red checked napkin.
    These cheesy almond flour muffins bake up golden and tender, with plenty of savory flavor in every bite.


     

    The Secret’s in the Almond Flour

    Cheesy almond flour muffins are tender, savory, and full of melted cheese. They’re the kind of muffins you can set out with a pot of chili or sneak for breakfast, and nobody at the table is going to ask if they’re “gluten-free.” They’ll just ask for seconds. Almond flour gives them a slightly nutty flavor and softer texture than muffins made with regular flour, and as a bonus, they’re naturally low carb.

    I can tell you how much I love these muffins, but don’t just take my word for it. A reader recently wrote:

    Featured reader review

    “Holy COW!! These are outstanding!! I subbed full fat yogurt for the sour cream and added fresh rosemary and parsley. I also used softened butter as it whisked in well. I will use a silicone muffin pan on my next go round as the stuck to my metal pan after baking but even so—they taste soooo cheesy good!! Company worthy for sure.”

    Shannie

    Add your review

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    I couldn’t agree more—the herbs sound amazing, and now I’m tempted to try her version myself.

    I’ve been baking with almond flour for years now, almond flour bread, and cheesy sausage balls are my favorites, and every single time I serve one of those recipes, people are surprised when I tell them what they’re made with. These muffins get that same reaction. They don’t taste like a substitute. They taste like a really good muffin.

    Why almond flour works so well here

    Almond flour makes these muffins moist and tender, never crumbly or dry. It also makes them a little more filling than your average muffin, which means they’re great to keep on hand. You can bake a batch, freeze half, and warm them up whenever you need a quick side or snack.

    And they’re easy to customize. Stir in chives for freshness, switch to pepper jack for a kick, or fold in some cooked bacon if you want something more breakfast-y. If you’re after a heartier texture, almond meal works too, though I usually reach for super-fine almond flour for a lighter bite.

    A muffin made with almond flour on a plate with a slice of butter.

    You don’t need a long shopping list either. Almond flour, eggs, and sour cream are the base, and from there it’s all about the cheese. Cheddar and mozzarella are great, but honestly, use whatever you have. Check the recipe card for the full list of ingredients, but those three are what give these their texture and flavor.

    Ingredients for almond flour muffins.

    Easy Steps, Big Payoff

    You can make a batch of low-carb cheesy muffins in less time then it takes your oven to pre-heat and no mixer is needed. Here are the three easy steps:

    • Whisk the dry ingredients.
    • Whisk the wet ingredients.
    • Stir it all together with the cheese, and bake.

    That’s it. No mixer, no long prep time, just cheesy muffins in about 20 minutes.

    A pile of cheesy muffins with almond flour.

    Once they’re cool, stash them in an airtight container or the freezer. They’ll last for weeks, and a quick warm-up in the toaster oven brings them right back to life.

    We’ve been eating them on repeat with soup during chilly Carolina evenings. I even tried a batch with bacon (thanks to a reader suggestion), and now I can’t stop making them that way for breakfast.

    If you loved this recipe, give it a star ⭐️⭐️⭐️⭐️⭐️ rating! Also, snap a picture of your finished dish and share it with me on Instagram using the hashtag #butterandbaggage and tagging me @butterandbaggage.

    Cheesy muffins with almond flour in a basket with a red napkin.

    Cheesy Almond Flour Muffins (Low Carb, Gluten-Free)

    Author: Barbara Curry
    Warm, cheesy, and tender, these almond flour muffins are the kind you’ll want to keep on repeat. The almond flour gives them a rich, slightly nutty flavor that feels special, while the gooey cheese makes them perfect with soup, chili, or even breakfast. They’re naturally gluten-free and low carb, but what you’ll really notice is how soft and delicious they are fresh from the oven.
    4.12 from 53 votes
    Print Pin
    PREP: 15 minutes minutes
    COOK: 12 minutes minutes
    TOTAL: 27 minutes minutes
    Servings: 15

    Ingredients
     

    • 3 cups almond flour
    • ½ teaspoon salt
    • 2 tablespoon baking powder
    • 4 eggs
    • ⅔ cup sour cream
    • 8 tablespoons butter melted
    • 1 ½ cup cheddar cheese shredded

    Instructions
     

    • Preheat oven to 400º and spray 15 cups of a muffin tin with cooking spray.
    • In a medium bowl, whisk together almond flour, salt and baking powder.
    • In a separate bowl, whisk together eggs, sour cream and butter until very well combined. Add to dry mixture and stir until just combined. Stir in cheese.
    • Spoon into muffin tins and bake for 12 minutes

    Video

    Barbara’s Tips + Notes
    • Try adding cooked bacon or sausage for a great breakfast or brunch option.
    • Don’t over mix the batter or they can get heavy. 
    • These are low carb and gluten free!
    • Feel free to change out the cheese for what you have on hand. Pepper jack would add a nice kick to go with the cheese.
    • Chop up chives and add them to the batter for another savory ingredient.
    • To make a batch for later, bake the muffins as directed. Allow them to cool completely. Place them in an airtight container and they will be good up to 3 months. Reheat them in a toaster oven when you’re ready to enjoy one.

    Nutrition

    Calories: 264kcal | Carbohydrates: 6g | Protein: 9g | Fat: 24g | Saturated Fat: 9g | Cholesterol: 77mg | Sodium: 227mg | Potassium: 203mg | Fiber: 2g | Sugar: 1g | Vitamin A: 427IU | Vitamin C: 1mg | Calcium: 217mg | Iron: 1mg
    Follow Me On SocialDid you make this recipe? Mention @ButterandBaggage or tag #ButterandBaggage on Instagram!

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    Comments

      4.12 from 53 votes (45 ratings without comment)

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      Recipe Rating




    1. Casey says

      November 19, 2019 at 4:05 pm

      5 stars
      Do these need to be refrigerated?

      I love these. I add half a cup of chia seeds, some turkey sausage and they turn out fabulous.

      Reply
      • Barbara Curry says

        November 21, 2019 at 7:41 pm

        You could leave them out for a day but I’ld refrigerate after that.

        Reply
    2. Jessica Wilson says

      November 30, 2019 at 5:45 pm

      5 stars
      Made these for our Thanksgiving dinner. I omitted the cheese but added Mrs. Dash’s Garlic & Herb and some granulated onion. Our guests–all 20-somethings–loved them. I did bake them in reusable silicone muffin cups, that made it easier to remove and clean. Just made a second batch because the first is gone.
      Thanks from Oregon!

      Reply
      • Barbara Curry says

        December 01, 2019 at 1:55 pm

        So glad they were a hit. I love using reusable silicone muffin cups, they are especially helpful if you are making a crustless quiche.

        Reply
    3. Tanya says

      January 17, 2020 at 10:18 pm

      These are amazing! The texture is perfect and I can’t wait to play around and add different ingredients to them. Thanks for this recipe!

      Reply
      • Barbara Curry says

        January 20, 2020 at 4:48 pm

        So glad you like them. You might also like Focaccia Bread with almond flour.

        Reply
    4. Mary_M says

      February 09, 2020 at 5:26 pm

      How do you whisk the butter in— should I melt it first? Or have it softened and use a mixer? So excited to try these.

      Reply
      • Barbara Curry says

        February 09, 2020 at 6:57 pm

        You can use softened butter, but I find it easier to melt it. Thanks for letting me know, I have updated the recipe.

        Reply
    5. Shawna says

      April 28, 2020 at 3:58 pm

      What is the serving size represented by the nutrition breakdown?

      Reply
      • Barbara Curry says

        April 28, 2020 at 4:30 pm

        It is based on 15 muffins.

        Reply
    6. debbie bergin says

      July 19, 2020 at 10:43 pm

      Hi if I want to add bacon do I reduce other ingredients like cheese?

      Reply
      • Barbara Curry says

        July 20, 2020 at 8:30 am

        You don’t need to change anything, just add cooked bacon with the cheese. I hope you like them.

        Reply
    7. Susan Marlow says

      September 03, 2020 at 4:42 am

      I followed the recipe exactly got 12 scones but they did not rise I think you only get 9. Maybe my muffin tins are to big!

      Reply
      • Barbara Curry says

        September 05, 2020 at 9:38 am

        I used a standard size muffin pan. They don’t rise as much as muffins made with regular flour but they should rise a bit. If not, it could be that your baking powder is old.

        Reply
    8. Sandra says

      September 20, 2020 at 2:28 pm

      5 stars
      Wow! Absolutely delicious 😋 Was looking for something I could dip in my eggs. These are perfect.

      Reply
      • Barbara Curry says

        September 20, 2020 at 8:34 pm

        So glad you loved them.

        Reply
    9. Aimee Bushong says

      September 25, 2020 at 4:09 pm

      Just made these. Delicious, however, they totally stuck to the muffin tin and so they are all deformed and have bits missing from the bottom that were left in the tin. I had some batter left over and simply rolled them into balls and put them on a cookie sheet and they came out perfect, like biscuits! Next time I’ll just do it this way. I also added avocado and some psyllium husk powder.

      Reply
      • Barbara Curry says

        September 27, 2020 at 7:16 pm

        I use a non-stick muffin pan and spray it with cooking spray. Glad to hear you found a work around.

        Reply
    10. Lynne says

      September 25, 2020 at 9:34 pm

      OMG they are so delish.
      I’ve just started on keto this week and am looking for things to eat for breakfast and a sub for bread, which I love.
      I made the basic recipe and then put stuff in from my fridge. I only had parmesan cheese so used this. Added pepper, 2 table spoons of tomato salsa and then ripped up some Danish salami and added dried Italian herbs.
      Next I will try with smoked paprika and bacon
      Going to freeze to have for lunches, breakfast and to dip in soups etc
      I did have to leave them in the oven for longer
      Thx from New Zealand

      Reply
      • Barbara Curry says

        September 27, 2020 at 7:19 pm

        I love them with bacon or sausage and some spicy cheese.

        Reply
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    Barbara Curry is the culinary adventurer of Butter & Baggage. With a dedicated enthusiasm for real butter made from happy cows she is in constant pursuit of delicious recipes and tasty dishes. She shares her experiences, ventures, and occasional misadventures because let’s face it things can get messy in any kitchen.

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